CDS

Accession Number TCMCG068C31466
gbkey CDS
Protein Id KAG5599337.1
Location complement(join(15919441..15919692,15919772..15919856,15920081..15920163,15920532..15920685,15922436..15922743,15924191..15924450,15924543..15924597))
Organism Solanum commersonii
locus_tag H5410_030707

Protein

Length 398aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA655804, BioSample:SAMN15755581
db_source JACXVP010000006.1
Definition hypothetical protein H5410_030707 [Solanum commersonii]
Locus_tag H5410_030707

EGGNOG-MAPPER Annotation

COG_category J
Description One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit
KEGG_TC -
KEGG_Module M00178        [VIEW IN KEGG]
M00179        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE br01610        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03011        [VIEW IN KEGG]
KEGG_ko ko:K02992        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03010        [VIEW IN KEGG]
map03010        [VIEW IN KEGG]
GOs GO:0000028        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003735        [VIEW IN EMBL-EBI]
GO:0005198        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005840        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019843        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0022618        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042255        [VIEW IN EMBL-EBI]
GO:0042274        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0070925        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071826        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAATCTCACCACTCCAATAGAAATTCCCTCTGCCCCTACCATACTCCATCTTGATAGTGCTTGCATCCACTGTATTACCGCGGCTACTGGCATAGAGTTAGTCGATGTTTATTCCCCAGATACTTTCATTTCTTCTTCTCCCAGAAAAGAAGTTAATGACCCGTGGGACTTCTACCTCCATGCAACATTGCTCCATCAGTCTTTCGCCCATTGCAGAAAATTCCCCACTTTTGCCTCCCGTAGGAGTCTAGGTTGTGTCTTAGTCCTAGTATGGTTGATCATCCTCCCATACCAGCTACTGCTAATCACCTTGAAACTAGAGTTGCATCTCTTTTCCATTCAAGTGTTCTTATGTGTCTCCATGCCCTTTGAGACCCCCAAAAATGGACAAATTCCTTTTTTTAGGAATACATACAATATTCTTCACTACAAAAAGGATAATGGTAACCTTACCATAACTACTTCATTTATGAATTTCATAGTAATAGAAATGCATGCCCTATCGAGACAGAATTTGGAACTTGATATCCTCTTTCCTAGCAGGCAAAGATTTACCTCTGTGGAAAGGATGATTTATTCGGATCGACATGAGAGTCCAACTACATTTCCAAAATTCATGTTGGTGACTTATCTATTAACTTTTCCACTATCACCCCAAAAAAAACCAAACACTGCCTTACGTAAAGTTTCTAGAGTACCATTAACCTCTGGATTTGAAATAGCTCCTTATATATCTGGTATTGGCCATAATCCACAAGAAAATCATTTAGTCTTAAATAGGTCCAAGTCAAATAGCAATGATTCAAACCACTTATTTTTACACTATTTCGAAAACCCAAGGACTCAATCGTATGGAATAAAATTGATTCTTGAACCCCCTTCACACTCATGTCACGTCAAGGTACTGCAAAAAGAAAAACAGAAAAATCTGATCCAATTTTTCAGCCATGAAAAAGATTCAACAAAACATAGAAACAAATCCACTATCGTTTTATGTCAAGAAATACGTGGAGTAACTCCAGAAATAACAATAAAAGCAAGACGTGTAGGTGGATTGACTCATAAAGTTCCCATTGAAATAAGATTCACACAAGGAAAAGCACTTTCCACTCATTGGTTATTAGTGGAATCCCGAAAACGTCCGGGTCAAATTAATATTTTCAAATTAAGTTCCCAATTAGTGTATGTTGCCTAA
Protein:  
MNLTTPIEIPSAPTILHLDSACIHCITAATGIELVDVYSPDTFISSSPRKEVNDPWDFYLHATLLHQSFAHCRKFPTFASRRSLGCVLVLVWLIILPYQLLLITLKLELHLFSIQVFLCVSMPFETPKNGQIPFFRNTYNILHYKKDNGNLTITTSFMNFIVIEMHALSRQNLELDILFPSRQRFTSVERMIYSDRHESPTTFPKFMLVTYLLTFPLSPQKKPNTALRKVSRVPLTSGFEIAPYISGIGHNPQENHLVLNRSKSNSNDSNHLFLHYFENPRTQSYGIKLILEPPSHSCHVKVLQKEKQKNLIQFFSHEKDSTKHRNKSTIVLCQEIRGVTPEITIKARRVGGLTHKVPIEIRFTQGKALSTHWLLVESRKRPGQINIFKLSSQLVYVA